A. Not using homologous sequences (example). Proteins are input in the FASTA format.
B. Homologous sequences are input by the user (example). Each protein is followed by at most 50 homologous sequences.
C. Homologous sequences will be found using BLAST search (example). This option only allows one protein in an input file. Warning: It may take a long time (~3 mins) to complete. Pease be patient!
Please set the E-value for the blast search:
Paste your protein sequences here: Or upload your file from:
When you submit files, please restrict your file sizes to
at most 10 MB.
For the training datasets and other information, please refer to User Instructions .
Prediction results on 11 different bacteria genomes using multiple sequence mode:
Escherichia coli O157:H7
Helicobacter pylori (Campylobacter pylori)
Yan's Group Webpage